Bin Zhang
Assistant Professor, Massachusetts Institute of Technology
Appearances
DateApril 13, 2021The three-dimensional organization of chromatin is expected to play critical roles in regulating genome functions. High-resolution characterization of its structure and dynamics could improve our understanding of gene regulation mechanisms but has remained challenging…Presenter
Assistant Professor, Massachusetts Institute of Technology
DateApril 15, 2021Many proteins have been shown to function via liquid-liquid phase separation. Computational modeling could offer much needed structural details of protein condensates and reveal the set of molecular interactions that dictate their stability…Presenter
Assistant Professor, Massachusetts Institute of Technology
DateApril 12, 2021Fast and accurate calculation of standard binding free energy has many important applications. Existing methodologies struggle at balancing accuracy and efficiency…Presenter
Speaker
Assistant Professor, Massachusetts Institute of Technology
SESSION: COMP POSTER SESSION:Presenter
NSF Graduate Research Fellow, Massachusetts Institute of TechnologySpeaker
Assistant Professor, Massachusetts Institute of Technology
DateAugust 25, 2021Division/Committee: [COMP] Division of Computers in ChemistryOrganizers
Temple UniversityAssociate Professor, University of KansasPresider
Assistant Professor, Massachusetts Institute of Technology- DateAugust 25, 2021Polycomb repressive complex 2 (PRC2) is an essential protein complex that silences gene expression via post-translational modifications of chromatin…
Presenter
Assistant Professor, Massachusetts Institute of Technology - DateAugust 23, 2021Many important biological processes, such as the formation of biomolecular condensates by liquid-liquid phase separation, involve interactions between a large number of both folded and disordered proteins…
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Assistant Professor, Massachusetts Institute of Technology - DateMarch 22, 2022Molecular simulations are powerful techniques for characterizing systems of interest at high resolution. To fully unleash the power of molecular simulations, however, several aspects need to be further improved…
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Assistant Professor, Massachusetts Institute of Technology - DateAugust 24, 2022Membrane proteins regulate several vital cellular processes, establishing them as major drug targets. A main function of membrane proteins is to transduce extracellular signal across the membrane bilayer…
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Speakers
Assistant Professor, Massachusetts Institute of TechnologyMassachusetts Institute of Technology - Coarse-graining is an appealing strategy for simulating complex biological systems by reducing the system size and computational cost…
Presenter
Assistant Professor, Massachusetts Institute of Technology - Division/Committee: [PHYS] Division of Physical Chemistry
Organizer, Presider
University of Nevada RenoOrganizers
University of HoustonUniversity of Maryland at College ParkAssistant Professor, Massachusetts Institute of Technology - Division/Committee: [PHYS] Division of Physical Chemistry
Organizers
University of Nevada RenoUniversity of HoustonUniversity of Maryland at College ParkOrganizer, Presider
Assistant Professor, Massachusetts Institute of Technology - The three-dimensional (3D) organization of eukaryotic genomes plays an important role in genome function…
Presenter
Assistant Professor, Massachusetts Institute of Technology - Division/Committee: [PHYS] Division of Physical Chemistry
Organizers
University of Nevada RenoUniversity of HoustonUniversity of Maryland at College ParkAssistant Professor, Massachusetts Institute of Technology - Division/Committee: [PHYS] Division of Physical Chemistry
Organizers
University of Nevada RenoUniversity of HoustonAssistant Professor, Massachusetts Institute of TechnologyOrganizer, Presider
- Division/Committee: [PHYS] Division of Physical Chemistry
Organizers
University of Nevada RenoAssistant Professor, Massachusetts Institute of TechnologyOrganizer, Presider
University of Houston - Coarse-graining is an appealing strategy for simulating complex biological systems by reducing the system size and computational cost…
Speaker
Assistant Professor, Massachusetts Institute of Technology - : [COMP] Division of Computers in Chemistry
Speakers
University of Illinois Urbana-ChampaignPennsylvania State UnivPrinceton UniversityPurdue UniversityAssistant Professor, Massachusetts Institute of Technology - Coarse-graining is an appealing strategy for simulating complex biological systems by reducing the system size and computational cost…
Speaker
Assistant Professor, Massachusetts Institute of Technology - : [COMP] Division of Computers in Chemistry
Speakers
University of Illinois Urbana-ChampaignPennsylvania State UnivPrinceton UniversityPurdue UniversityAssistant Professor, Massachusetts Institute of Technology - : [COMP] Division of Computers in Chemistry
Speakers
University of South FloridaAssociate Professor, Messiah CollegeIndiana Univ Purdue Univ IndianapolisUniversity of KentuckyFordham UniversityAssociate Professor of Chemistry, University of KentuckyBrooklyn CollegeUniversity of PittsburghUniversity of Texas at El Paso University Research InstituteGeorgia Institute of TechnologyGeorgia Institute of TechPhD student, Carnegie Mellon UniversityPhD Student, Carnegie Mellon UniversityCarnegie Mellon UniversityUniversity of AkronAssociate Professor of Chemistry, Missouri State UniversityRutgers The State University of New JerseyCarnegie Mellon UniversityResearch Scientist, Lawrence Berkeley National LaboratoryE O Lawrence Berkeley National LaboratoryAssistant Professor, Massachusetts Institute of TechnologyRutgers UniversityGraduate Student, University of Minnesota Twin CitiesUC BerkeleyUC BerkeleyPostdoctoral Associate, University of MinnesotaUniversity of Chicago Division of the Physical SciencesMassachusetts Institute of TechnologyThe University of Texas at DallasWayne State UniversityCatalytic principles from natural enzymes for design of synthetic catalysts, University of California San DiegoUniversity of MissouriUniversity of California San DiegoPostdoctoral Research Scholar, University of California, San DiegoUniversity of California, San DiegoRice UniversityGraduate Student, University of VictoriaUniversity of MarylandProfessor, Uppsala UniversityRheinisch Westfalische Technische Hochschule Aachen Fakultat fur Mathematik Informatik und NaturwissenschaftenHead of Lab Linked Scientific Knowledge, Technische InformationsbibliothekCalifornia Institute of TechnologyUniversity of California RiversideUniversity of CaliforniaGraduate Student, Rutgers UniversityUniv of Ontario Inst of TechSchrodinger IncMathew D. Halls, Ph.D.Senior Vice President, Materials Science, Schrödinger, Inc.Assistant Professor, Missouri State UniversityAssociate Professor, University of KansasPh.D. Student, Massachusetts Institute of TechnologyStony Brook UniversityCarlos Simmerling, PhDProfessor, SUNY Stony BrookProfessor, Indian Institute of Technology KharagpurAssociate Professor, Western University of Health SciencesAssociate Professor of Chemistry, Centenary UniversityPhD Student, Indian Institute of Technology JammuPennsylvania State UnivTexas A&M UniversityNationwide Children's HospitalUniv. of Maryland, PharmacyUniversity of PittsburghUniv of North CarolinaAssistant Professor, Eastern Illinois UniversityUniversity of Texas at DallasBrown UnivUniversity of South FloridaThe University of OklahomaUniversity of Kentucky College of Arts and SciencesChemistry Graduate Student, University of IowaUniversity of IowaThe University of MississippiPurdue UniversityAssistant Professor, University of FindlayAssociate Professor of Chemistry, University of FindlayJohns Hopkins UniversityJohns Hopkins UniversityUniversity of Illinois at Urbana-ChampaignUniversity of MinnesotaThe University of MemphisClarkson UniversityApplication Scientist, OptibriumLafayette CollegeIndian Institute of Technology DelhiUniversity of Wisconsin-Eau ClaireComputational Scientist, Pacific Nortwest National LaboratoryGraduate Student Researcher, University of California San DiegoUniversity of PittsburghMichigan State UniversityArgonne National LaboratoryMichigan State UniversityPostdoctoral Research Scholar, Michigan State UniversityMichigan State UniversityStaff Scientist, Sandia National LabsArizona State UniversityProfessor, Haverford CollegeNorth Dakota State UniversityAssociate Professor, North Dakota State UniversityPennsylvania State UniversityTexas A&M UnivIndiana UnivOld Dominion UniversityNorth Dakota State UniversityAssistant Professor, University of South Carolina SystemFlorida Gulf Coast UniversityAssociate Professor, Texas A&M University SystemSyracuse UniversityAssistant Professor, Oakland UniversityNorth Carolina State University - Coarse-graining is an appealing strategy for simulating complex biological systems by reducing the system size and computational cost…
Speaker
Assistant Professor, Massachusetts Institute of Technology - : [COMP] Division of Computers in Chemistry
Speakers
University of Illinois Urbana-ChampaignPennsylvania State UnivPrinceton UniversityPurdue UniversityAssistant Professor, Massachusetts Institute of Technology - : [COMP] Division of Computers in Chemistry
Speakers
University of South FloridaAssociate Professor, Messiah CollegeIndiana Univ Purdue Univ IndianapolisUniversity of KentuckyFordham UniversityAssociate Professor of Chemistry, University of KentuckyBrooklyn CollegeUniversity of PittsburghUniversity of Texas at El Paso University Research InstituteGeorgia Institute of TechnologyGeorgia Institute of TechPhD student, Carnegie Mellon UniversityPhD Student, Carnegie Mellon UniversityCarnegie Mellon UniversityUniversity of AkronAssociate Professor of Chemistry, Missouri State UniversityRutgers The State University of New JerseyCarnegie Mellon UniversityResearch Scientist, Lawrence Berkeley National LaboratoryE O Lawrence Berkeley National LaboratoryAssistant Professor, Massachusetts Institute of TechnologyRutgers UniversityGraduate Student, University of Minnesota Twin CitiesUC BerkeleyUC BerkeleyPostdoctoral Associate, University of MinnesotaUniversity of Chicago Division of the Physical SciencesMassachusetts Institute of TechnologyThe University of Texas at DallasWayne State UniversityCatalytic principles from natural enzymes for design of synthetic catalysts, University of California San DiegoUniversity of MissouriUniversity of California San DiegoPostdoctoral Research Scholar, University of California, San DiegoUniversity of California, San DiegoRice UniversityGraduate Student, University of VictoriaUniversity of MarylandProfessor, Uppsala UniversityRheinisch Westfalische Technische Hochschule Aachen Fakultat fur Mathematik Informatik und NaturwissenschaftenHead of Lab Linked Scientific Knowledge, Technische InformationsbibliothekCalifornia Institute of TechnologyUniversity of California RiversideUniversity of CaliforniaGraduate Student, Rutgers UniversityUniv of Ontario Inst of TechSchrodinger IncMathew D. Halls, Ph.D.Senior Vice President, Materials Science, Schrödinger, Inc.Assistant Professor, Missouri State UniversityAssociate Professor, University of KansasPh.D. Student, Massachusetts Institute of TechnologyStony Brook UniversityCarlos Simmerling, PhDProfessor, SUNY Stony BrookProfessor, Indian Institute of Technology KharagpurAssociate Professor, Western University of Health SciencesAssociate Professor of Chemistry, Centenary UniversityPhD Student, Indian Institute of Technology JammuPennsylvania State UnivTexas A&M UniversityNationwide Children's HospitalUniv. of Maryland, PharmacyUniversity of PittsburghUniv of North CarolinaAssistant Professor, Eastern Illinois UniversityUniversity of Texas at DallasBrown UnivUniversity of South FloridaThe University of OklahomaUniversity of Kentucky College of Arts and SciencesChemistry Graduate Student, University of IowaUniversity of IowaThe University of MississippiPurdue UniversityAssistant Professor, University of FindlayAssociate Professor of Chemistry, University of FindlayJohns Hopkins UniversityJohns Hopkins UniversityUniversity of Illinois at Urbana-ChampaignUniversity of MinnesotaThe University of MemphisClarkson UniversityApplication Scientist, OptibriumLafayette CollegeIndian Institute of Technology DelhiUniversity of Wisconsin-Eau ClaireComputational Scientist, Pacific Nortwest National LaboratoryGraduate Student Researcher, University of California San DiegoUniversity of PittsburghMichigan State UniversityArgonne National LaboratoryMichigan State UniversityPostdoctoral Research Scholar, Michigan State UniversityMichigan State UniversityStaff Scientist, Sandia National LabsArizona State UniversityProfessor, Haverford CollegeNorth Dakota State UniversityAssociate Professor, North Dakota State UniversityPennsylvania State UniversityTexas A&M UnivIndiana UnivOld Dominion UniversityNorth Dakota State UniversityAssistant Professor, University of South Carolina SystemFlorida Gulf Coast UniversityAssociate Professor, Texas A&M University SystemSyracuse UniversityAssistant Professor, Oakland UniversityNorth Carolina State University - DateMarch 28, 2023Coarse-graining is an appealing strategy for simulating complex biological systems by reducing the system size and computational cost…
Presenter
Assistant Professor, Massachusetts Institute of Technology - DateMarch 28, 2023Coarse-graining is an appealing strategy for simulating complex biological systems by reducing the system size and computational cost. We have been developing algorithms that hold the promise to transform the practice of bottom-up coarse-graining, i.e…
Presenter
Assistant Professor, Massachusetts Institute of Technology - DateMarch 26, 2023DIVISION/COMMITTEE: [PHYS] Division of Physical Chemistry
Organizer, Presider
University of Nevada RenoOrganizers
University of HoustonUniversity of Maryland at College ParkAssistant Professor, Massachusetts Institute of Technology - DateMarch 26, 2023DIVISION/COMMITTEE: [PHYS] Division of Physical Chemistry
Organizers
University of Nevada RenoUniversity of HoustonUniversity of Maryland at College ParkOrganizer, Presider
Assistant Professor, Massachusetts Institute of Technology - DateMarch 26, 2023The three-dimensional (3D) organization of eukaryotic genomes plays an important role in genome function…
Presenter
Assistant Professor, Massachusetts Institute of Technology - DateMarch 27, 2023DIVISION/COMMITTEE: [PHYS] Division of Physical Chemistry
Organizers
University of Nevada RenoUniversity of HoustonUniversity of Maryland at College ParkAssistant Professor, Massachusetts Institute of TechnologyOrganizer, Presider
- DateMarch 27, 2023DIVISION/COMMITTEE: [PHYS] Division of Physical Chemistry
Organizers
University of Nevada RenoUniversity of HoustonAssistant Professor, Massachusetts Institute of TechnologyOrganizer, Presider
University of Maryland at College Park - DateMarch 28, 2023DIVISION/COMMITTEE: [PHYS] Division of Physical Chemistry
Organizers
University of Nevada RenoUniversity of Maryland at College ParkAssistant Professor, Massachusetts Institute of TechnologyOrganizer, Presider
University of Houston - DateAugust 15, 2023Single-molecule Förster resonance energy transfer (smFRET) is spectroscopic ruler that has been extensively used to probe the structure, dynamics and binding of biomolecules…
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Speakers
Assistant Professor, Massachusetts Institute of TechnologyMassachusetts Institute of Technology - DateAugust 16, 2023Explicit treatment of solvent molecules in molecular dynamics (MD) simulations more accurately models the system solvent environment but introduces significant computational cost that limits long time-scale simulation…
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PhD Student, MITSpeakers
Assistant Professor, Massachusetts Institute of Technology - DateAugust 16, 2023Coarse-grained models have proven helpful for simulating complex systems over long time scales to provide molecular insights into various processes…
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Speaker
Assistant Professor, Massachusetts Institute of Technology - DateMarch 19, 2024Chromatin's role in governing genome function, encompassing DNA transcription, replication, and repair, is tightly linked to its intricate organizational structure within the nucleus. Despite its significance, deciphering the complexity of chromatin has been challenging…
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Speakers
Assistant Professor, Massachusetts Institute of TechnologyUniversity of Wisconsin-Madison - DateAugust 19, 2024Coarse-graining (CG) techniques are routinely employed in molecular dynamics (MD) simulations of biomolecules to enable sampling of long-time scale phenomena. CG models reduce degrees of freedom by representing the atoms of various functional groups as single “beads”…
Presenter
PhD Student, MITSpeaker
Assistant Professor, Massachusetts Institute of Technology - DateAugust 21, 2024DIVISION/COMMITTEE: [PHYS] Division of Physical Chemistry
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University of California San DiegoOrganizer, Presider
Assistant Professor, Massachusetts Institute of Technology - DateAugust 21, 2024DIVISION/COMMITTEE: [PHYS] Division of Physical Chemistry
Organizers
Assistant Professor, Massachusetts Institute of TechnologyOrganizer, Presider
University of California San Diego - DateAugust 22, 2024DIVISION/COMMITTEE: [PHYS] Division of Physical Chemistry
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University of California San DiegoOrganizer, Presider
Assistant Professor, Massachusetts Institute of Technology - DateAugust 20, 2024DIVISION/COMMITTEE: [PHYS] Division of Physical Chemistry
Organizer, Presider
Organizers
University of California San DiegoAssistant Professor, Massachusetts Institute of Technology - DateAugust 20, 2024DIVISION/COMMITTEE: [PHYS] Division of Physical Chemistry
Organizers
Assistant Professor, Massachusetts Institute of TechnologyOrganizer, Presider
University of California San Diego - DateAugust 20, 2024Biomolecular condensates play a vital role in organizing cellular chemistry. They selectively partition biomolecules, preventing unwanted cross-talk and buffering against chemical noise…
Presenter
Assistant Professor, Massachusetts Institute of Technology - DateMarch 25, 2025DIVISION/COMMITTEE: [PHYS: Division of Physical Chemistry] [PHYS: Division of Physical Chemistry]
Organizers
Arizona State UniversityChemistry Univ of IllinoisPresiders
University of California Los AngelesAssistant Professor, Massachusetts Institute of Technology - DateMarch 25, 2025Implicit solvent models play a crucial role in molecular dynamics simulations of biomolecules, balancing computational efficiency with biological accuracy…
Presenter
Assistant Professor, Massachusetts Institute of Technology - DateMarch 25, 2025The three-dimensional organization of the genome plays a crucial role in DNA-templated processes such as gene transcription, regulation, and replication…
Presenter
Assistant Professor, Massachusetts Institute of Technology - DateAugust 19, 2025Ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO) is an enzyme responsible for catalyzing the carbon fixation reaction of the Calvin cycle. Unfortunately, RuBisCO is slow and susceptible to an oxygenation reaction. Rising temperatures will exacerbate these deficiencies…
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Co-Author
Assistant Professor, Massachusetts Institute of Technology - DateAugust 20, 2025Implicit solvent models are essential for molecular dynamics (MD) simulations of biomolecules…
Presenter
PhD Student, MITCo-Author
Assistant Professor, Massachusetts Institute of Technology
